Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine transporter sstt | C9115_11195 | Not Available | Positive | 2289387 - 2290631 | 43480.4 |
| ygjv family protein | C9115_11200 | Not Available | Negative | 2290636 - 2291187 | 20576.8 |
| altronate dehydratase | C9115_11205 | Not Available | Negative | 2291270 - 2292757 | 54126.2 |
| glucuronate isomerase | C9115_11210 | Not Available | Negative | 2292772 - 2294184 | 53986.1 |
| hexuronate transporter | C9115_11215 | Not Available | Positive | 2294667 - 2295965 | 46909.1 |
| pilus assembly protein cbld | C9115_11220 | Not Available | Negative | 2296053 - 2297141 | 40468.0 |
| fimbrial protein | C9115_11225 | Not Available | Negative | 2297138 - 2299822 | 98566.9 |
| fimbrial protein | C9115_11230 | Not Available | Negative | 2299914 - 2300414 | 17741.6 |
| fimbrial protein | C9115_11235 | Not Available | Negative | 2300444 - 2301067 | 23115.7 |
| transcriptional regulator exur | C9115_11240 | Not Available | Positive | 2301456 - 2302232 | 29837.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




