Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase nickel incorporation protein hybf | C9115_10740 | Not Available | Negative | 2193451 - 2193792 | 12698.1 |
| hydrogenase-2 operon protein hybe | C9115_10745 | Not Available | Negative | 2193785 - 2194273 | 17964.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | C9115_10750 | Not Available | Negative | 2194266 - 2194760 | 17781.9 |
| hydrogenase-2 large chain | C9115_10755 | Not Available | Negative | 2194760 - 2196463 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | C9115_10760 | Not Available | Negative | 2196460 - 2197638 | 43604.7 |
| hydrogenase-2 operon protein hyba | C9115_10765 | Not Available | Negative | 2197628 - 2198614 | 36005.0 |
| hydrogenase-2 small chain | C9115_10770 | Not Available | Negative | 2198617 - 2199735 | 39654.3 |
| duf2623 domain-containing protein | C9115_10775 | Not Available | Negative | 2199924 - 2200211 | 10946.1 |
| dienelactone hydrolase family protein | C9115_10780 | Not Available | Negative | 2200330 - 2201217 | 32584.6 |
| aldo/keto reductase | C9115_10785 | Not Available | Positive | 2201374 - 2202414 | 38816.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




