Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthetic protein fliq | C9115_10580 | Not Available | Positive | 2163913 - 2164182 | 9563.42 |
| flagellar type iii secretion system protein flir | C9115_10585 | Not Available | Positive | 2164190 - 2164975 | 28521.3 |
| transcriptional regulator rcsa | C9115_10590 | Not Available | Positive | 2165265 - 2165888 | 23536.8 |
| protein dsrb | C9115_10595 | Not Available | Negative | 2165932 - 2166174 | 9071.8 |
| hypothetical protein | C9115_10600 | Not Available | Negative | 2166107 - 2166295 | 7014.32 |
| stress-induced protein yodd | C9115_10605 | Not Available | Positive | 2166283 - 2166510 | 8579.66 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | C9115_10610 | Not Available | Positive | 2166808 - 2167623 | 30457.9 |
| cellulose biosynthesis regulator yedq | C9115_10615 | Not Available | Negative | 2167620 - 2169314 | 64268.5 |
| hypothetical protein | C9115_10620 | Not Available | Negative | 2169275 - 2169469 | 7571.39 |
| duf2158 domain-containing protein | C9115_10625 | Not Available | Negative | 2169552 - 2169734 | 6688.89 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




