Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebb family permuted papain-like enzyme | C9115_10170 | Not Available | Positive | 2089939 - 2090541 | 22676.2 |
| crossover junction endodeoxyribonuclease ruvc | C9115_10175 | Not Available | Negative | 2090543 - 2091064 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | C9115_10180 | Not Available | Negative | 2091099 - 2091839 | 26438.1 |
| dihydroneopterin triphosphate diphosphatase | C9115_10185 | Not Available | Negative | 2091868 - 2092320 | 17222.5 |
| aspartate--trna ligase | C9115_10190 | Not Available | Negative | 2092313 - 2094085 | 65873.2 |
| hydrolase | C9115_10195 | Not Available | Positive | 2094395 - 2094961 | 20450.3 |
| duf72 domain-containing protein | C9115_10200 | Not Available | Positive | 2094958 - 2095776 | 31480.8 |
| hypothetical protein | C9115_10205 | Not Available | Positive | 2095829 - 2096224 | 15209.2 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | C9115_10210 | Not Available | Positive | 2096265 - 2097008 | 27792.3 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | C9115_10215 | Not Available | Positive | 2097005 - 2097976 | 37128.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




