Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2627 domain-containing protein | C9115_09970 | Not Available | Negative | 2051134 - 2051277 | 5212.44 |
| hypothetical protein | C9115_09975 | Not Available | Negative | 2051947 - 2052234 | 10779.1 |
| phop/phoq regulator mgrb | C9115_09980 | Not Available | Negative | 2052309 - 2052452 | 5552.09 |
| hypothetical protein | C9115_09985 | Not Available | Positive | 2052611 - 2052850 | 8514.67 |
| dna-binding transcriptional regulator kdgr | C9115_09990 | Not Available | Negative | 2052993 - 2053784 | 29988.1 |
| mfs transporter | C9115_09995 | Not Available | Positive | 2053961 - 2055337 | 48297.9 |
| protease htpx | C9115_10000 | Not Available | Negative | 2055383 - 2056264 | 31959.3 |
| carboxy terminal-processing peptidase | C9115_10005 | Not Available | Negative | 2056456 - 2058504 | 76551.2 |
| rna chaperone proq | C9115_10010 | Not Available | Negative | 2058524 - 2059222 | 25863.9 |
| gaf domain-containing protein | C9115_10015 | Not Available | Negative | 2059319 - 2059816 | 18080.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




