Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | C9115_09870 | Not Available | Negative | 2030555 - 2031670 | 42214.0 |
| long-chain-fatty-acid--coa ligase fadd | C9115_09875 | Not Available | Negative | 2031752 - 2033437 | 62325.6 |
| slp family lipoprotein yeay | C9115_09880 | Not Available | Negative | 2033642 - 2034223 | 20931.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | C9115_09885 | Not Available | Negative | 2034263 - 2034958 | 25164.2 |
| atp-dependent dna helicase | C9115_09890 | Not Available | Negative | 2035016 - 2036926 | 70365.9 |
| rida family protein | C9115_09895 | Not Available | Positive | 2037058 - 2037402 | 12493.9 |
| duf1889 family protein | C9115_09900 | Not Available | Positive | 2037765 - 2038124 | 13259.0 |
| yoah family protein | C9115_09905 | Not Available | Negative | 2038244 - 2038423 | 6554.7 |
| aminodeoxychorismate synthase component 1 | C9115_09910 | Not Available | Positive | 2038497 - 2039858 | 51016.3 |
| coa pyrophosphatase | C9115_09915 | Not Available | Positive | 2039862 - 2040440 | 21464.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




