Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel import atp-binding protein nikd | C9115_07840 | Not Available | Positive | 1605020 - 1605784 | 26835.1 |
| nickel import atp-binding protein nike | C9115_07845 | Not Available | Positive | 1605781 - 1606587 | 29700.5 |
| nickel-responsive transcriptional regulator nikr | C9115_07850 | Not Available | Positive | 1606593 - 1606994 | 15094.7 |
| type ii toxin-antitoxin system hicb family antitoxin | C9115_07855 | Not Available | Negative | 1607114 - 1607473 | 13403.0 |
| inner membrane transport permease yhhj | C9115_07865 | Not Available | Negative | 1607804 - 1608928 | 41050.2 |
| abc transporter atp-binding protein/permease | C9115_07870 | Not Available | Negative | 1608928 - 1611663 | 100803.0 |
| hlyd family secretion protein | C9115_07875 | Not Available | Negative | 1611660 - 1612727 | 38804.5 |
| duf4049 domain-containing protein | C9115_07880 | Not Available | Negative | 1613093 - 1614715 | 61349.9 |
| duf2776 domain-containing protein | C9115_07890 | Not Available | Positive | 1616948 - 1618000 | 37673.3 |
| nad(p)/fad-dependent oxidoreductase | C9115_07895 | Not Available | Negative | 1618316 - 1619518 | 43769.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




