Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207656 bp
Thymine Count
1210951 bp
Guanine Count
1239828 bp
Cytosine Count
1254687 bp
Genome Length
4919637 bp
Protein-coding Genes
4426 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4092 domain-containing protein | C9115_04250 | Not Available | Positive | 848357 - 852922 | 168407.0 |
| prepilin peptidase | C9115_04255 | Not Available | Positive | 853062 - 853871 | 29525.9 |
| hypothetical protein | C9115_04260 | Not Available | Positive | 853937 - 854347 | 14670.9 |
| type ii secretion system protein gspc | C9115_04265 | Not Available | Positive | 854365 - 855324 | 35759.2 |
| type ii secretion system protein gspd | C9115_04270 | Not Available | Positive | 855354 - 857414 | 74192.1 |
| type ii secretion system protein gspe | C9115_04275 | Not Available | Positive | 857414 - 858907 | 55206.8 |
| type ii secretion system protein gspf | C9115_04280 | Not Available | Positive | 858907 - 860130 | 44972.7 |
| type ii secretion system protein gspg | C9115_04285 | Not Available | Positive | 860147 - 860602 | 16663.8 |
| type ii secretion system protein gsph | C9115_04290 | Not Available | Positive | 860606 - 861169 | 21155.7 |
| type ii secretion system protein gspi | C9115_04295 | Not Available | Positive | 861166 - 861537 | 13573.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




