Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0337 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1281938 bp
Thymine Count
1283993 bp
Guanine Count
1316270 bp
Cytosine Count
1331031 bp
Genome Length
5219897 bp
Protein-coding Genes
4700 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | C9113_17110 | Not Available | Positive | 3517566 - 3519428 | 67592.9 |
| aldo/keto reductase | C9113_17115 | Not Available | Positive | 3519483 - 3520457 | 36421.3 |
| phosphatidylglycerophosphatase a | C9113_17120 | Not Available | Negative | 3520511 - 3521029 | 19419.2 |
| thiamine-phosphate kinase | C9113_17125 | Not Available | Negative | 3521007 - 3521984 | 35146.8 |
| transcription antitermination factor nusb | C9113_17130 | Not Available | Negative | 3522062 - 3522481 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | C9113_17135 | Not Available | Negative | 3522501 - 3522971 | 16157.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9113_17140 | Not Available | Negative | 3523060 - 3524163 | 40345.6 |
| transcriptional regulator nrdr | C9113_17145 | Not Available | Negative | 3524167 - 3524616 | 17229.9 |
| duf3251 domain-containing protein | C9113_17150 | Not Available | Positive | 3524767 - 3525306 | 19633.6 |
| nucleoside-specific channel-forming protein tsx | C9113_17155 | Not Available | Positive | 3525605 - 3526489 | 33590.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




