Escherichia coli strain FWSEC0337

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0337 is a Gram-negative, rod-shaped bacterium that is a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions. This strain is motile, possessing flagella, and typically exists in pairs or as single cells. Its optimal growth temperature is 37°C, which aligns with its mesophilic nature. FWSEC0337 is host-associated, indicating a biotic relationship with various organisms, including Homo sapiens (humans), Gallus gallus (chickens), and Bos taurus (cattle), among others. It has been implicated in numerous health issues, particularly in humans, where it can cause urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis, among other conditions. The diverse range of hosts suggests a broad ecological niche, making it capable of affecting many species, including mammals, birds, and even plants such as Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). The pathogenicity of strain FWSEC0337 is significant, as it is associated with various health effects, including severe complications like hemolytic uremic syndrome (HUS) and septicemia. This strain's ability to cause infections in both humans and animals underlines its potential impact on public health and agricultural practices. Understanding the specific interactions and pathogenic mechanisms of this strain could provide insights into mitigating its effects in both clinical and environmental settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0337

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0337
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0337 plasmid unnamed1

Gene Summary

Adenine Count

1281938 bp

Thymine Count

1283993 bp

Guanine Count

1316270 bp

Cytosine Count

1331031 bp

Genome Length

5219897 bp

Protein-coding Genes

4700 genes

Non-Coding Genes

347 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nfed family proteinC9113_16750Not AvailablePositive3440865 - 344132316939.8
transcriptional regulatorC9113_16755Not AvailableNegative3441324 - 344173115236.0
amino acid permeaseC9113_16760Not AvailableNegative3441856 - 344314845661.5
glutaminaseC9113_16765Not AvailableNegative3443151 - 344408332920.2
copper-exporting p-type atpase copaC9113_16770Not AvailablePositive3444345 - 344684987956.6
addiction module antidote protein, higa familyC9113_16775Not AvailableNegative3446963 - 344730413141.8
hypothetical proteinC9113_16785Not AvailablePositive3447442 - 344823629977.3
cys-trna(pro)/cys-trna(cys) deacylase ybakC9113_16790Not AvailablePositive3448440 - 344891917093.9
bifunctional udp-sugar hydrolase/5'-nucleotidaseC9113_16795Not AvailableNegative3448956 - 345060860813.4
fosmidomycin resistance proteinC9113_16800Not AvailablePositive3450826 - 345204643308.2

Displaying genes 3351 – 3360 of 5049 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total