Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0337 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1281938 bp
Thymine Count
1283993 bp
Guanine Count
1316270 bp
Cytosine Count
1331031 bp
Genome Length
5219897 bp
Protein-coding Genes
4700 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | C9113_16390 | Not Available | Negative | 3372368 - 3372991 | 23594.1 |
| nad-dependent dna ligase ligb | C9113_16395 | Not Available | Positive | 3373249 - 3374931 | 63214.8 |
| trimeric intracellular cation channel family protein | C9113_16400 | Not Available | Negative | 3374928 - 3375545 | 22049.8 |
| dna damage-inducible protein d | C9113_16405 | Not Available | Negative | 3375836 - 3376438 | 22842.1 |
| yicc family protein | C9113_16410 | Not Available | Negative | 3376659 - 3377522 | 33160.9 |
| ribonuclease ph | C9113_16415 | Not Available | Positive | 3377649 - 3378365 | 25327.4 |
| orotate phosphoribosyltransferase | C9113_16420 | Not Available | Positive | 3378430 - 3379071 | 23568.3 |
| nucleoid occlusion factor slma | C9113_16425 | Not Available | Negative | 3379108 - 3379704 | 22837.7 |
| dutp diphosphatase | C9113_16430 | Not Available | Negative | 3379811 - 3380266 | 16157.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | C9113_16435 | Not Available | Negative | 3380247 - 3381467 | 43452.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




