Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0337 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1281938 bp
Thymine Count
1283993 bp
Guanine Count
1316270 bp
Cytosine Count
1331031 bp
Genome Length
5219897 bp
Protein-coding Genes
4700 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | C9113_12805 | Not Available | Negative | 2604909 - 2605784 | 31852.5 |
| autoinducer 2 abc transporter permease lsrd | C9113_12815 | Not Available | Negative | 2606817 - 2607770 | 32820.6 |
| autoinducer 2 abc transporter permease lsrc | C9113_12820 | Not Available | Negative | 2607770 - 2608798 | 36376.0 |
| lsrr family transcriptional regulator | C9113_12830 | Not Available | Positive | 2610571 - 2611524 | 33816.0 |
| autoinducer-2 kinase | C9113_12835 | Not Available | Positive | 2611603 - 2613195 | 57532.0 |
| autotransporter barrel domain-containing lipoprotein | C9113_12840 | Not Available | Positive | 2613726 - 2619146 | 188596.0 |
| transcriptional regulator | C9113_12845 | Not Available | Positive | 2619355 - 2619621 | 10047.9 |
| type ii toxin-antitoxin system hipa family toxin | C9113_12850 | Not Available | Positive | 2619621 - 2620943 | 49424.9 |
| fimbrial protein | C9113_12865 | Not Available | Positive | 2621896 - 2622459 | 19145.6 |
| fimbrial chaperone protein fimc | C9113_12870 | Not Available | Positive | 2622820 - 2623530 | 26111.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




