Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0337 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1281938 bp
Thymine Count
1283993 bp
Guanine Count
1316270 bp
Cytosine Count
1331031 bp
Genome Length
5219897 bp
Protein-coding Genes
4700 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein ynek | C9113_12755 | Not Available | Negative | 2595165 - 2595623 | 17582.9 |
| lysr family transcriptional regulator | C9113_12760 | Not Available | Negative | 2595701 - 2596582 | 32423.8 |
| succinate-semialdehyde dehydrogenase | C9113_12765 | Not Available | Positive | 2596683 - 2598071 | 49603.6 |
| glutaminase 2 | C9113_12770 | Not Available | Positive | 2598135 - 2599061 | 33517.6 |
| duf4186 domain-containing protein | C9113_12775 | Not Available | Positive | 2599061 - 2599420 | 13544.5 |
| diguanylate cyclase | C9113_12780 | Not Available | Positive | 2599559 - 2600977 | 52212.6 |
| tagaturonate reductase | C9113_12785 | Not Available | Positive | 2601204 - 2602655 | 54825.4 |
| hypothetical protein | C9113_12790 | Not Available | Positive | 2602862 - 2603776 | 34751.9 |
| trans-aconitate 2-methyltransferase | C9113_12795 | Not Available | Negative | 2603780 - 2604538 | 29043.6 |
| autoinducer 2-degrading protein lsrg | C9113_12800 | Not Available | Negative | 2604595 - 2604885 | 11269.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




