Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0337 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1281938 bp
Thymine Count
1283993 bp
Guanine Count
1316270 bp
Cytosine Count
1331031 bp
Genome Length
5219897 bp
Protein-coding Genes
4700 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa oxygenase/reductase subunit paak | C9113_11555 | Not Available | Negative | 2374301 - 2375371 | 39312.3 |
| phenylacetate-coa oxygenase subunit paaj | C9113_11560 | Not Available | Negative | 2375379 - 2375876 | 18405.2 |
| phenylacetate-coa oxygenase subunit paai | C9113_11565 | Not Available | Negative | 2375891 - 2376637 | 27880.0 |
| 1,2-phenylacetyl-coa epoxidase subunit b | C9113_11570 | Not Available | Negative | 2376646 - 2376933 | 10942.8 |
| 1,2-phenylacetyl-coa epoxidase subunit a | C9113_11575 | Not Available | Negative | 2376945 - 2377874 | 35461.2 |
| phenylacetic acid degradation bifunctional protein paaz | C9113_11580 | Not Available | Positive | 2378159 - 2380204 | 72989.8 |
| primary-amine oxidase | C9113_11585 | Not Available | Positive | 2380452 - 2382725 | 84413.3 |
| transcriptional activator fear | C9113_11595 | Not Available | Positive | 2384513 - 2385418 | 34622.3 |
| duf1318 domain-containing protein | C9113_11600 | Not Available | Negative | 2385590 - 2385916 | 11908.5 |
| ynbe family lipoprotein | C9113_11605 | Not Available | Negative | 2385924 - 2386109 | 6826.49 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




