Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0323 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1242168 bp
Thymine Count
1235662 bp
Guanine Count
1266805 bp
Cytosine Count
1278329 bp
Genome Length
5028902 bp
Protein-coding Genes
4562 genes
Non-Coding Genes
294 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqae/pmp3 family membrane protein | C9099_19295 | Not Available | Positive | 3996579 - 3996737 | 5865.57 |
| peptidoglycan-binding protein lysm | C9099_19300 | Not Available | Positive | 3996821 - 3997270 | 16053.0 |
| transcriptional regulator | C9099_19305 | Not Available | Negative | 3997271 - 3997933 | 24992.3 |
| gaba permease | C9099_19310 | Not Available | Negative | 3997954 - 3999354 | 51113.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C9099_19315 | Not Available | Negative | 3999665 - 4000945 | 45690.3 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | C9099_19320 | Not Available | Negative | 4000959 - 4002407 | 51770.1 |
| l-2-hydroxyglutarate oxidase | C9099_19325 | Not Available | Negative | 4002430 - 4003698 | 46113.7 |
| protein csid | C9099_19330 | Not Available | Negative | 4003718 - 4004695 | 37386.6 |
| Trna-met | Not Available | Not Available | Positive | 4007843 - 4007918 | Not Available |
| dna invertase | C9099_19350 | Not Available | Positive | 4010398 - 4010685 | 11064.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





