Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0323 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1242168 bp
Thymine Count
1235662 bp
Guanine Count
1266805 bp
Cytosine Count
1278329 bp
Genome Length
5028902 bp
Protein-coding Genes
4562 genes
Non-Coding Genes
294 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | C9099_17240 | Not Available | Positive | 3565035 - 3566537 | 56106.2 |
| l-ribulose-5-phosphate 4-epimerase | C9099_17245 | Not Available | Positive | 3566706 - 3567401 | 25548.4 |
| dna polymerase ii | C9099_17250 | Not Available | Positive | 3567476 - 3569827 | 90073.8 |
| rna polymerase-associated protein rapa | C9099_17255 | Not Available | Positive | 3569992 - 3572898 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | C9099_17260 | Not Available | Positive | 3572910 - 3573569 | 24862.1 |
| co-chaperone djla | C9099_17265 | Not Available | Negative | 3573686 - 3574501 | 30567.2 |
| lps-assembly protein lptd | C9099_17270 | Not Available | Positive | 3574756 - 3577110 | 89675.8 |
| chaperone sura | C9099_17275 | Not Available | Positive | 3577163 - 3578449 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | C9099_17280 | Not Available | Positive | 3578449 - 3579438 | 35210.9 |
| ribosomal rna small subunit methyltransferase a | C9099_17285 | Not Available | Positive | 3579435 - 3580256 | 30422.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





