Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0323 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1242168 bp
Thymine Count
1235662 bp
Guanine Count
1266805 bp
Cytosine Count
1278329 bp
Genome Length
5028902 bp
Protein-coding Genes
4562 genes
Non-Coding Genes
294 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | C9099_16885 | Not Available | Positive | 3488033 - 3488758 | 26759.2 |
| elongation factor ts | C9099_16890 | Not Available | Positive | 3489016 - 3489867 | 30424.7 |
| ump kinase | C9099_16895 | Not Available | Positive | 3490014 - 3490739 | 25971.9 |
| ribosome recycling factor | C9099_16900 | Not Available | Positive | 3491031 - 3491588 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C9099_16905 | Not Available | Positive | 3491680 - 3492876 | 43390.5 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | C9099_16910 | Not Available | Positive | 3493065 - 3493823 | 28314.5 |
| phosphatidate cytidylyltransferase | C9099_16915 | Not Available | Positive | 3493836 - 3494693 | 31455.6 |
| sigma e protease regulator rsep | C9099_16920 | Not Available | Positive | 3494705 - 3496057 | 49074.2 |
| outer membrane protein assembly factor bama | C9099_16925 | Not Available | Positive | 3496087 - 3498519 | 90557.5 |
| chaperone protein skp | C9099_16930 | Not Available | Positive | 3498641 - 3499126 | 17689.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





