Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0323 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1242168 bp
Thymine Count
1235662 bp
Guanine Count
1266805 bp
Cytosine Count
1278329 bp
Genome Length
5028902 bp
Protein-coding Genes
4562 genes
Non-Coding Genes
294 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase small subunit nird | C9099_09610 | Not Available | Positive | 1989372 - 1989698 | 12284.7 |
| nitrite transporter nirc | C9099_09615 | Not Available | Positive | 1989825 - 1990631 | 28564.1 |
| uroporphyrinogen-iii c-methyltransferase | C9099_09620 | Not Available | Positive | 1990650 - 1992023 | 49984.4 |
| duf4223 domain-containing protein | C9099_09625 | Not Available | Positive | 1992278 - 1992445 | 5819.16 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | C9099_09630 | Not Available | Negative | 1992552 - 1993637 | 38615.7 |
| hypothetical protein | C9099_09635 | Not Available | Negative | 1993649 - 1994953 | 46447.2 |
| duf2620 domain-containing protein | C9099_09640 | Not Available | Negative | 1994965 - 1995318 | 12463.4 |
| phosphotriesterase-related protein | C9099_09645 | Not Available | Negative | 1995329 - 1996207 | 32855.3 |
| phosphopentomutase | C9099_09650 | Not Available | Negative | 1996204 - 1997430 | 44597.3 |
| yhfx family plp-dependent enzyme | C9099_09655 | Not Available | Negative | 1997430 - 1998593 | 42386.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





