Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0323 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1242168 bp
Thymine Count
1235662 bp
Guanine Count
1266805 bp
Cytosine Count
1278329 bp
Genome Length
5028902 bp
Protein-coding Genes
4562 genes
Non-Coding Genes
294 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein ynek | C9099_05830 | Not Available | Negative | 1207586 - 1208293 | 27194.0 |
| putative protein ynek | C9099_05835 | Not Available | Negative | 1208242 - 1208700 | 17582.9 |
| lysr family transcriptional regulator | C9099_05840 | Not Available | Negative | 1208778 - 1209659 | 32408.8 |
| succinate-semialdehyde dehydrogenase | C9099_05845 | Not Available | Positive | 1209760 - 1211148 | 49647.6 |
| glutaminase 2 | C9099_05850 | Not Available | Positive | 1211212 - 1212138 | 33517.6 |
| duf4186 domain-containing protein | C9099_05855 | Not Available | Positive | 1212138 - 1212497 | 13544.5 |
| diguanylate cyclase | C9099_05860 | Not Available | Positive | 1212636 - 1214054 | 52212.6 |
| tagaturonate reductase | C9099_05865 | Not Available | Positive | 1214281 - 1215732 | 54825.4 |
| hypothetical protein | C9099_05870 | Not Available | Positive | 1215939 - 1216853 | 34751.9 |
| trans-aconitate 2-methyltransferase | C9099_05875 | Not Available | Negative | 1216857 - 1217615 | 29043.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





