Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0323 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1242168 bp
Thymine Count
1235662 bp
Guanine Count
1266805 bp
Cytosine Count
1278329 bp
Genome Length
5028902 bp
Protein-coding Genes
4562 genes
Non-Coding Genes
294 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C9099_05730 | Not Available | Negative | 1189177 - 1189863 | 26566.7 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | C9099_05735 | Not Available | Negative | 1189952 - 1190698 | 27250.5 |
| peptidyl-dipeptidase dcp | C9099_05740 | Not Available | Positive | 1190835 - 1192880 | 77488.8 |
| 2-oxo-tetronate isomerase | C9099_05745 | Not Available | Negative | 1192925 - 1193443 | 18280.8 |
| ydei family stress tolerance ob fold protein | C9099_05750 | Not Available | Positive | 1193719 - 1194111 | 14119.0 |
| sensor domain-containing diguanylate cyclase | C9099_05755 | Not Available | Positive | 1194366 - 1195256 | 33895.5 |
| protein mgts | C9099_05760 | Not Available | Negative | 1195475 - 1195570 | 3509.36 |
| efflux mfs transporter ydee | C9099_05765 | Not Available | Negative | 1195697 - 1196884 | 42585.4 |
| o-acetylserine/cysteine exporter | C9099_05770 | Not Available | Positive | 1197079 - 1197978 | 32349.3 |
| gntr family transcriptional regulator | C9099_05775 | Not Available | Negative | 1198023 - 1198721 | 26464.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





