Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | C9096_23225 | Not Available | Negative | 4758266 - 4758757 | 18660.9 |
| ompa family protein | C9096_23230 | Not Available | Negative | 4758815 - 4760467 | 60364.2 |
| dotu family type iv/vi secretion system protein | C9096_23235 | Not Available | Negative | 4760480 - 4761145 | 25274.7 |
| type vi secretion system baseplate subunit tssk | C9096_23240 | Not Available | Negative | 4761142 - 4762479 | 49603.7 |
| type vi secretion system contractile sheath large subunit | C9096_23245 | Not Available | Negative | 4762497 - 4764035 | 58092.8 |
| type vi secretion system contractile sheath small subunit | C9096_23250 | Not Available | Negative | 4764094 - 4764594 | 18656.3 |
| Trna-met | Not Available | Not Available | Positive | 4765229 - 4765305 | Not Available |
| hypothetical protein | C9096_23370 | Not Available | Positive | 4782898 - 4783083 | 6933.12 |
| autotransporter outer membrane beta-barrel domain-containing protein | C9096_23375 | Not Available | Negative | 4783185 - 4786563 | 120116.0 |
| helix-turn-helix domain-containing protein | C9096_23380 | Not Available | Negative | 4787462 - 4788199 | 28362.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





