Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | C9096_22245 | Not Available | Positive | 4573938 - 4574462 | 19410.0 |
| type vi secretion system baseplate subunit tssk | C9096_22250 | Not Available | Positive | 4574465 - 4575796 | 49966.9 |
| dotu family type iv/vi secretion system protein | C9096_22255 | Not Available | Positive | 4575801 - 4576562 | 29415.8 |
| type vi secretion system atpase tssh | C9096_22260 | Not Available | Positive | 4576571 - 4579330 | 100854.0 |
| type vi secretion system-associated protein tago | C9096_22265 | Not Available | Positive | 4579327 - 4580070 | 26492.8 |
| type vi secretion system protein tssa | C9096_22270 | Not Available | Positive | 4580075 - 4581487 | 52362.2 |
| type vi secretion system membrane subunit tssm | C9096_22275 | Not Available | Positive | 4581596 - 4585030 | 130743.0 |
| hypothetical protein | C9096_22280 | Not Available | Positive | 4585041 - 4586393 | 50692.3 |
| hcp family type vi secretion system effector | C9096_22285 | Not Available | Positive | 4586417 - 4586842 | 15759.9 |
| hypothetical protein | C9096_22290 | Not Available | Positive | 4586943 - 4587857 | 34023.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





