Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease modulator hflc | C9096_20965 | Not Available | Negative | 4308096 - 4309100 | 37652.0 |
| ftsh protease activity modulator hflk | C9096_20970 | Not Available | Negative | 4309103 - 4310362 | 45547.5 |
| gtpase hflx | C9096_20975 | Not Available | Negative | 4310448 - 4311728 | 48329.0 |
| rna-binding protein hfq | C9096_20980 | Not Available | Negative | 4311804 - 4312112 | 11167.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | C9096_20985 | Not Available | Negative | 4312198 - 4313148 | 35067.1 |
| dna mismatch repair endonuclease mutl | C9096_20990 | Not Available | Negative | 4313141 - 4314988 | 67911.6 |
| n-acetylmuramoyl-l-alanine amidase amib | C9096_20995 | Not Available | Negative | 4314998 - 4316335 | 47959.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | C9096_21000 | Not Available | Negative | 4316354 - 4316815 | 16854.0 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | C9096_21005 | Not Available | Negative | 4316787 - 4318334 | 54549.3 |
| trna epoxyqueuosine(34) reductase queg | C9096_21010 | Not Available | Positive | 4318333 - 4319472 | 43017.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





