Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase fada | C9096_19110 | Not Available | Negative | 3942873 - 3944036 | 40853.7 |
| fatty acid oxidation complex subunit alpha fadb | C9096_19115 | Not Available | Negative | 3944046 - 3946235 | 79611.5 |
| xaa-pro dipeptidase | C9096_19120 | Not Available | Positive | 3946425 - 3947756 | 50178.9 |
| impact family protein | C9096_19125 | Not Available | Positive | 3947756 - 3948370 | 21708.1 |
| trk system potassium uptake protein trkh | C9096_19130 | Not Available | Positive | 3948409 - 3949860 | 52962.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | C9096_19135 | Not Available | Positive | 3949872 - 3950417 | 21257.5 |
| type iv secretion protein rhs | C9096_19140 | Not Available | Negative | 3950728 - 3950824 | 3149.76 |
| 50s ribosomal protein l31 | C9096_19145 | Not Available | Negative | 3950984 - 3951196 | 7871.49 |
| primosomal protein n' | C9096_19150 | Not Available | Positive | 3951399 - 3953597 | 81666.6 |
| transcriptional regulator | C9096_19155 | Not Available | Positive | 3953753 - 3954778 | 37822.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





