Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dknyy family protein | C9096_18910 | Not Available | Negative | 3904266 - 3905579 | 49691.1 |
| dknyy family protein | C9096_18915 | Not Available | Negative | 3905576 - 3907054 | 57031.2 |
| duf3304 domain-containing protein | C9096_18920 | Not Available | Negative | 3907422 - 3907976 | 20564.7 |
| hypothetical protein | C9096_18925 | Not Available | Positive | 3908326 - 3908529 | 7177.59 |
| diaminopimelate epimerase | C9096_18930 | Not Available | Positive | 3908566 - 3909390 | 30210.4 |
| duf484 domain-containing protein | C9096_18935 | Not Available | Positive | 3909387 - 3910094 | 26730.4 |
| tyrosine recombinase xerc | C9096_18940 | Not Available | Positive | 3910091 - 3910987 | 33869.7 |
| flavin mononucleotide phosphatase yigb | C9096_18945 | Not Available | Positive | 3910987 - 3911703 | 27123.4 |
| dna helicase ii | C9096_18950 | Not Available | Positive | 3911787 - 3913949 | 81964.6 |
| phosphodiester glycosidase family protein | C9096_18955 | Not Available | Negative | 3914096 - 3914860 | 28039.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





