Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate abc transporter substrate-binding protein | C9096_18600 | Not Available | Positive | 3842353 - 3843339 | 36002.1 |
| carbohydrate kinase | C9096_18605 | Not Available | Positive | 3843343 - 3844839 | 55247.1 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | C9096_18610 | Not Available | Positive | 3844836 - 3845498 | 23534.2 |
| l-ribulose-5-phosphate 3-epimerase | C9096_18615 | Not Available | Positive | 3845491 - 3846351 | 32513.0 |
| l-ribulose-5-phosphate 4-epimerase sgbe | C9096_18620 | Not Available | Positive | 3846345 - 3847040 | 25562.3 |
| mipa/ompv family protein | C9096_18630 | Not Available | Negative | 3847387 - 3848127 | 27383.9 |
| lysr family transcriptional regulator | C9096_18635 | Not Available | Positive | 3848251 - 3849225 | 37245.4 |
| hlyd family secretion protein | C9096_18640 | Not Available | Negative | 3849222 - 3850358 | 41799.6 |
| duf3302 domain-containing protein | C9096_18645 | Not Available | Negative | 3850364 - 3850687 | 12404.2 |
| aldehyde dehydrogenase | C9096_18655 | Not Available | Negative | 3851232 - 3852770 | 56339.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





