Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | C9096_18030 | Not Available | Negative | 3713722 - 3715224 | 56106.2 |
| ribulokinase | C9096_18035 | Not Available | Negative | 3715235 - 3716935 | 61159.7 |
| arabinose operon regulatory protein | C9096_18040 | Not Available | Positive | 3717274 - 3718152 | 33385.8 |
| deda family protein | C9096_18045 | Not Available | Positive | 3718238 - 3719002 | 28213.8 |
| thiamine abc transporter atp-binding protein thiq | C9096_18050 | Not Available | Negative | 3719104 - 3719802 | 25111.8 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | C9096_18055 | Not Available | Negative | 3719786 - 3721396 | 59391.6 |
| thiamine abc transporter substrate binding subunit | C9096_18060 | Not Available | Negative | 3721372 - 3722355 | 36208.2 |
| hth-type transcriptional regulator sgrr | C9096_18065 | Not Available | Negative | 3722519 - 3724174 | 64028.8 |
| glucose uptake inhibitor sgrt | C9096_18070 | Not Available | Positive | 3724263 - 3724394 | 5338.42 |
| mfs transporter | C9096_18075 | Not Available | Positive | 3724496 - 3725674 | 42754.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





