Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimeric intracellular cation channel family protein | C9096_16955 | Not Available | Negative | 3482250 - 3482867 | 22049.8 |
| dna damage-inducible protein d | C9096_16960 | Not Available | Negative | 3483159 - 3483983 | 31080.6 |
| yicc family protein | C9096_16965 | Not Available | Negative | 3484204 - 3485067 | 33160.9 |
| ribonuclease ph | C9096_16970 | Not Available | Positive | 3485194 - 3485910 | 25327.4 |
| orotate phosphoribosyltransferase | C9096_16975 | Not Available | Positive | 3485976 - 3486617 | 23567.4 |
| nucleoid occlusion factor slma | C9096_16980 | Not Available | Negative | 3486654 - 3487250 | 22837.7 |
| dutp diphosphatase | C9096_16985 | Not Available | Negative | 3487357 - 3487812 | 16157.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | C9096_16990 | Not Available | Negative | 3487793 - 3489013 | 43435.6 |
| jab domain-containing protein | C9096_16995 | Not Available | Positive | 3489185 - 3489853 | 25275.9 |
| 50s ribosomal protein l28 | C9096_17000 | Not Available | Positive | 3490070 - 3490306 | 9007.02 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





