Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1198 domain-containing protein | C9096_16855 | Not Available | Positive | 3458654 - 3459106 | 17220.1 |
| purine ribonucleoside efflux pump nepi | C9096_16860 | Not Available | Positive | 3459317 - 3460507 | 41901.6 |
| hypothetical protein | C9096_16865 | Not Available | Negative | 3460548 - 3460841 | 11070.3 |
| lipoprotein 28 | C9096_16870 | Not Available | Positive | 3461063 - 3461881 | 29425.3 |
| dmt family transporter | C9096_16875 | Not Available | Negative | 3461885 - 3462808 | 33115.4 |
| sugar efflux transporter setb | C9096_16880 | Not Available | Negative | 3462919 - 3464103 | 43466.0 |
| cytoplasmic protein | C9096_16885 | Not Available | Negative | 3464485 - 3464631 | 5444.61 |
| Trna-sec(p) | Not Available | Not Available | Positive | 3464744 - 3464834 | Not Available |
| inner membrane symporter yicj | C9096_16895 | Not Available | Positive | 3465127 - 3466509 | 50951.4 |
| alpha-xylosidase | C9096_16900 | Not Available | Positive | 3466519 - 3468837 | 88084.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





