Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase regulatory protein hyca | C9096_16500 | Not Available | Positive | 3389289 - 3389750 | 17627.9 |
| formate hydrogenlyase subunit 2 | C9096_16505 | Not Available | Positive | 3389875 - 3390486 | 21888.4 |
| formate hydrogenlyase subunit 3 | C9096_16510 | Not Available | Positive | 3390483 - 3392309 | 64145.2 |
| formate hydrogenlyase subunit 4 | C9096_16515 | Not Available | Positive | 3392312 - 3393235 | 33031.4 |
| formate hydrogenlyase subunit 5 | C9096_16520 | Not Available | Positive | 3393253 - 3394962 | 64970.1 |
| 4fe-4s dicluster domain-containing protein | C9096_16525 | Not Available | Positive | 3394972 - 3395514 | 20300.4 |
| nadh-quinone oxidoreductase subunit nuob | C9096_16530 | Not Available | Positive | 3395514 - 3396281 | 27999.7 |
| formate hydrogenlyase maturation protein hych | C9096_16535 | Not Available | Positive | 3396278 - 3396688 | 15465.5 |
| hydrogenase maturation peptidase hyci | C9096_16540 | Not Available | Positive | 3396681 - 3397151 | 17027.6 |
| hypothetical protein | C9096_16545 | Not Available | Positive | 3397194 - 3397949 | 28348.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





