Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate/nitrite transporter nark | C9096_15880 | Not Available | Positive | 3260595 - 3261986 | 49696.3 |
| nitrate reductase subunit alpha | C9096_15885 | Not Available | Positive | 3262502 - 3266245 | 140466.0 |
| nitrate reductase subunit beta | C9096_15890 | Not Available | Positive | 3266242 - 3267780 | 58083.6 |
| nitrate reductase molybdenum cofactor assembly chaperone | C9096_15895 | Not Available | Positive | 3267777 - 3268487 | 26444.3 |
| respiratory nitrate reductase subunit gamma | C9096_15900 | Not Available | Positive | 3268487 - 3269164 | 25484.9 |
| Trna-tyr | Not Available | Not Available | Positive | 3269526 - 3269610 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3269645 - 3269729 | Not Available |
| formyltetrahydrofolate deformylase | C9096_15920 | Not Available | Negative | 3269889 - 3270731 | 31922.6 |
| ychj family protein | C9096_15925 | Not Available | Negative | 3270781 - 3271239 | 16991.2 |
| patatin family protein | C9096_15930 | Not Available | Positive | 3271352 - 3272257 | 33041.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





