Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein fimf | C9096_13590 | Not Available | Negative | 2814478 - 2815008 | 18716.3 |
| fimbrial biogenesis outer membrane usher protein | C9096_13595 | Not Available | Negative | 2815018 - 2817654 | 96467.8 |
| chaperone protein fimc | C9096_13600 | Not Available | Negative | 2817721 - 2818446 | 26630.5 |
| fimbrin-like protein fimi | C9096_13605 | Not Available | Negative | 2818483 - 2819022 | 19374.4 |
| type-1 fimbrial protein subunit a | C9096_13610 | Not Available | Negative | 2819087 - 2819635 | 18126.2 |
| type 1 fimbriae regulatory protein fime | C9096_13615 | Not Available | Negative | 2820116 - 2820712 | 23117.6 |
| type 1 fimbriae regulatory protein fimb | C9096_13620 | Not Available | Negative | 2821190 - 2821792 | 22994.8 |
| n-acetylneuraminic acid channel protein | C9096_13625 | Not Available | Positive | 2823248 - 2823964 | 27903.4 |
| n-acetylneuraminate epimerase | C9096_13630 | Not Available | Positive | 2823983 - 2825089 | 39559.3 |
| sialate o-acetylesterase | C9096_13635 | Not Available | Positive | 2825154 - 2826134 | 36943.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





