Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoprotocatechuate degradative operon repressor | C9096_13390 | Not Available | Negative | 2772860 - 2773306 | 17255.8 |
| 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase | C9096_13395 | Not Available | Positive | 2773578 - 2774867 | 47098.9 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | C9096_13400 | Not Available | Positive | 2774864 - 2776330 | 53030.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | C9096_13405 | Not Available | Positive | 2776332 - 2777183 | 32020.2 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | C9096_13410 | Not Available | Positive | 2777193 - 2777573 | 14295.3 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | C9096_13415 | Not Available | Positive | 2777684 - 2778487 | 29716.5 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | C9096_13420 | Not Available | Positive | 2778498 - 2779286 | 28088.8 |
| 4-hydroxyphenylacetate permease | C9096_13425 | Not Available | Positive | 2779461 - 2780837 | 50571.6 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | C9096_13430 | Not Available | Positive | 2780847 - 2781737 | 34332.0 |
| 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component | C9096_13435 | Not Available | Positive | 2781988 - 2783550 | 58882.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





