Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycjx family protein | C9096_12045 | Not Available | Positive | 2476136 - 2477533 | 52655.6 |
| tigr01620 family protein | C9096_12050 | Not Available | Positive | 2477530 - 2478591 | 39363.5 |
| tyrr family transcriptional regulator | C9096_12055 | Not Available | Positive | 2478739 - 2480280 | 57659.5 |
| 2-cys peroxiredoxin | C9096_12060 | Not Available | Negative | 2480324 - 2480830 | 17836.3 |
| l-ala-d/l-glu epimerase | C9096_12065 | Not Available | Positive | 2480949 - 2481914 | 34645.0 |
| murein peptide amidase a | C9096_12070 | Not Available | Negative | 2481889 - 2482617 | 26575.4 |
| sdr family oxidoreductase | C9096_12075 | Not Available | Negative | 2482908 - 2483546 | 23339.2 |
| alpha/beta hydrolase | C9096_12080 | Not Available | Negative | 2483564 - 2484496 | 34103.5 |
| alpha/beta hydrolase | C9096_12085 | Not Available | Negative | 2484496 - 2485416 | 33680.4 |
| peptide abc transporter substrate-binding protein | C9096_12095 | Not Available | Positive | 2486789 - 2488402 | 59889.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





