Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0320 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262688 bp
Thymine Count
1263234 bp
Guanine Count
1293183 bp
Cytosine Count
1303739 bp
Genome Length
5128974 bp
Protein-coding Genes
4654 genes
Non-Coding Genes
302 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hica family toxin | C9096_10945 | Not Available | Positive | 2257123 - 2257398 | 10152.5 |
| type ii toxin-antitoxin system hicb family antitoxin | C9096_10950 | Not Available | Positive | 2257395 - 2257754 | 13403.0 |
| nickel-responsive transcriptional regulator nikr | C9096_10955 | Not Available | Negative | 2257874 - 2258275 | 15094.7 |
| nickel import atp-binding protein nike | C9096_10960 | Not Available | Negative | 2258281 - 2259087 | 29700.5 |
| nickel import atp-binding protein nikd | C9096_10965 | Not Available | Negative | 2259084 - 2259848 | 26851.2 |
| nickel abc transporter permease subunit nikc | C9096_10970 | Not Available | Negative | 2259848 - 2260681 | 30363.8 |
| nickel abc transporter permease subunit nikb | C9096_10975 | Not Available | Negative | 2260678 - 2261622 | 35250.3 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | C9096_10980 | Not Available | Negative | 2261622 - 2263196 | 58791.3 |
| 4'-phosphopantetheinyl transferase | C9096_10985 | Not Available | Negative | 2263307 - 2263894 | 21738.9 |
| ai-2e family transporter | C9096_10990 | Not Available | Negative | 2263949 - 2264998 | 38538.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





