Escherichia coli strain FWSEC0320

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0320 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic, capable of thriving in both aerobic and anaerobic environments. It typically exists in pairs or singles and possesses flagella, indicating mobility. This strain is mesophilic, with an optimal growth temperature of 37°C. FWSEC0320 is associated with a wide range of hosts, including various mammals (such as humans, cattle, and canines), birds, and even some plants like Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). Its biotic relationship is characterized as free-living, suggesting its ability to survive outside of host organisms. The strain is noted for its significant health implications in humans and other animals, being linked to urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). These associations highlight its potential as a pathogen, particularly in the context of foodborne illness and nosocomial infections. Given its diverse host range and pathogenic potential, E. coli strain FWSEC0320 exemplifies the complexity of microbial interactions within ecological systems. Its ability to cause various health issues underscores the importance of understanding bacterial behavior in both clinical and environmental contexts, particularly as it relates to public health and food safety.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0320

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0320
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0320 plasmid unnamed3

Gene Summary

Adenine Count

1262688 bp

Thymine Count

1263234 bp

Guanine Count

1293183 bp

Cytosine Count

1303739 bp

Genome Length

5128974 bp

Protein-coding Genes

4654 genes

Non-Coding Genes

302 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c4-dicarboxylate transporter dcucC9096_08535Not AvailablePositive1774103 - 177547048790.9
clpxp protease specificity-enhancing factorC9096_08540Not AvailableNegative1775513 - 177601018263.4
stringent starvation protein aC9096_08545Not AvailableNegative1776016 - 177665424306.3
hypothetical proteinC9096_08550Not AvailablePositive1776910 - 17771318401.09
30s ribosomal protein s9C9096_08555Not AvailableNegative1777049 - 177744114857.1
50s ribosomal protein l13C9096_08560Not AvailableNegative1777457 - 177788516019.5
cell division protein zapeC9096_08565Not AvailableNegative1778104 - 177923143112.1
duf1043 family proteinC9096_08570Not AvailablePositive1779425 - 177982314961.7
periplasmic ph-dependent serine endoprotease degqC9096_08575Not AvailablePositive1779977 - 178134447207.9
serine endoprotease degsC9096_08580Not AvailablePositive1781434 - 178250137613.4

Displaying genes 1841 – 1850 of 4962 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total