Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0298 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311236 bp
Thymine Count
1315804 bp
Guanine Count
1317367 bp
Cytosine Count
1346325 bp
Genome Length
5300977 bp
Protein-coding Genes
4915 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | C9085_21295 | Not Available | Positive | 4327810 - 4330605 | 101955.0 |
| type vi secretion system-associated protein tago | C9085_21300 | Not Available | Positive | 4330602 - 4331345 | 26462.8 |
| type vi secretion system protein tssa | C9085_21305 | Not Available | Positive | 4331350 - 4332762 | 52341.2 |
| hypothetical protein | C9085_21315 | Not Available | Positive | 4336315 - 4337667 | 50649.3 |
| hcp family type vi secretion system effector | C9085_21320 | Not Available | Positive | 4337691 - 4338173 | 18000.5 |
| hypothetical protein | C9085_21325 | Not Available | Positive | 4338217 - 4339131 | 33993.4 |
| hypothetical protein | C9085_21330 | Not Available | Positive | 4339141 - 4339620 | 18100.9 |
| Trna-asp | Not Available | Not Available | Positive | 4340826 - 4340902 | Not Available |
| dna polymerase iii subunit epsilon | C9085_21345 | Not Available | Negative | 4341035 - 4341766 | 27101.5 |
| ribonuclease hi | C9085_21350 | Not Available | Positive | 4341831 - 4342298 | 17597.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





