Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0298 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311236 bp
Thymine Count
1315804 bp
Guanine Count
1317367 bp
Cytosine Count
1346325 bp
Genome Length
5300977 bp
Protein-coding Genes
4915 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | C9085_19030 | Not Available | Negative | 3906981 - 3907580 | 21756.1 |
| host specificity protein j | C9085_19035 | Not Available | Negative | 3907651 - 3909452 | 64682.3 |
| anta/antb antirepressor family protein | C9085_19045 | Not Available | Negative | 3909599 - 3910432 | 31204.4 |
| hypothetical protein | C9085_19050 | Not Available | Negative | 3910445 - 3910876 | 16352.6 |
| alpa family transcriptional regulator | C9085_19055 | Not Available | Negative | 3910876 - 3911073 | 7691.19 |
| hypothetical protein | C9085_19060 | Not Available | Negative | 3911271 - 3912152 | 33766.2 |
| duf4102 domain-containing protein | C9085_19065 | Not Available | Negative | 3912295 - 3913509 | 45732.2 |
| Trna-thr | Not Available | Not Available | Positive | 3913675 - 3913750 | Not Available |
| glutamate-5-semialdehyde dehydrogenase | C9085_19080 | Not Available | Negative | 3913865 - 3915118 | 44618.7 |
| glutamate 5-kinase | C9085_19085 | Not Available | Negative | 3915130 - 3916233 | 39058.9 |
Pathways
1160 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





