Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0298 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311236 bp
Thymine Count
1315804 bp
Guanine Count
1317367 bp
Cytosine Count
1346325 bp
Genome Length
5300977 bp
Protein-coding Genes
4915 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin hoka | C9085_12965 | Not Available | Positive | 2697207 - 2697359 | 5912.47 |
| cold-shock protein | C9085_12970 | Not Available | Negative | 2697547 - 2697759 | 7403.66 |
| hth-type transcriptional regulator | C9085_12975 | Not Available | Negative | 2698040 - 2698330 | 11033.5 |
| duf3053 domain-containing protein | C9085_12980 | Not Available | Positive | 2698764 - 2699474 | 25678.5 |
| glyoxylate/hydroxypyruvate reductase ghrb | C9085_12985 | Not Available | Negative | 2699524 - 2700498 | 35398.5 |
| lipoprotein | C9085_12990 | Not Available | Negative | 2700602 - 2701261 | 22198.6 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | C9085_12995 | Not Available | Positive | 2701414 - 2703747 | 85896.4 |
| n-acetyltransferase | C9085_13000 | Not Available | Negative | 2703716 - 2704156 | 17175.9 |
| dna-3-methyladenine glycosylase i | C9085_13005 | Not Available | Negative | 2704153 - 2704716 | 21073.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | C9085_13010 | Not Available | Positive | 2704874 - 2705572 | 25962.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





