Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0298 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311236 bp
Thymine Count
1315804 bp
Guanine Count
1317367 bp
Cytosine Count
1346325 bp
Genome Length
5300977 bp
Protein-coding Genes
4915 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3302 domain-containing protein | C9085_12810 | Not Available | Positive | 2664868 - 2665191 | 12404.2 |
| hlyd family secretion protein | C9085_12815 | Not Available | Positive | 2665197 - 2666333 | 41744.6 |
| lysr family transcriptional regulator | C9085_12820 | Not Available | Negative | 2666330 - 2667304 | 37276.5 |
| mipa/ompv family protein | C9085_12825 | Not Available | Positive | 2667428 - 2668168 | 27383.9 |
| l-ribulose-5-phosphate 4-epimerase | C9085_12835 | Not Available | Negative | 2668515 - 2669210 | 25620.3 |
| l-ribulose-5-phosphate 3-epimerase | C9085_12840 | Not Available | Negative | 2669204 - 2670064 | 32513.0 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | C9085_12845 | Not Available | Negative | 2670057 - 2670719 | 23562.2 |
| carbohydrate kinase | C9085_12850 | Not Available | Negative | 2670716 - 2672212 | 55305.2 |
| trap transporter substrate-binding protein | C9085_12855 | Not Available | Negative | 2672216 - 2673202 | 35989.1 |
| 2,3-diketo-l-gulonate trap transporter permease | C9085_12860 | Not Available | Negative | 2673215 - 2674492 | 45371.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





