Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0298 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311236 bp
Thymine Count
1315804 bp
Guanine Count
1317367 bp
Cytosine Count
1346325 bp
Genome Length
5300977 bp
Protein-coding Genes
4915 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| naat family transporter yche | C9085_11715 | Not Available | Negative | 2442506 - 2443153 | 23522.7 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | C9085_11720 | Not Available | Positive | 2443630 - 2446305 | 96132.5 |
| thymidine kinase | C9085_11730 | Not Available | Negative | 2447607 - 2448224 | 23399.9 |
| dna-binding protein h-ns | C9085_11735 | Not Available | Positive | 2448829 - 2449242 | 15556.5 |
| utp--glucose-1-phosphate uridylyltransferase | C9085_11740 | Not Available | Negative | 2449386 - 2450294 | 32944.2 |
| two-component system response regulator rssb | C9085_11745 | Not Available | Negative | 2450496 - 2451509 | 37273.5 |
| patatin family protein | C9085_11750 | Not Available | Negative | 2451601 - 2452506 | 33041.0 |
| ychj family protein | C9085_11755 | Not Available | Positive | 2452619 - 2453077 | 16991.2 |
| formyltetrahydrofolate deformylase | C9085_11760 | Not Available | Positive | 2453127 - 2453969 | 31922.6 |
| Trna-tyr | Not Available | Not Available | Positive | 2454129 - 2454213 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





