Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0298 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311236 bp
Thymine Count
1315804 bp
Guanine Count
1317367 bp
Cytosine Count
1346325 bp
Genome Length
5300977 bp
Protein-coding Genes
4915 genes
Non-Coding Genes
318 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mn2+/zn2+abc transporter atp-binding protein | C9085_10640 | Not Available | Positive | 2231051 - 2231806 | 27869.3 |
| zinc abc transporter permease subunit znub | C9085_10645 | Not Available | Positive | 2231803 - 2232588 | 27762.5 |
| holliday junction branch migration dna helicase ruvb | C9085_10650 | Not Available | Negative | 2232735 - 2233745 | 37176.0 |
| holliday junction branch migration protein ruva | C9085_10655 | Not Available | Negative | 2233754 - 2234365 | 22117.0 |
| hypothetical protein | C9085_10660 | Not Available | Negative | 2234504 - 2234569 | 2699.43 |
| yebb family permuted papain-like enzyme | C9085_10665 | Not Available | Positive | 2234640 - 2235242 | 22660.2 |
| crossover junction endodeoxyribonuclease ruvc | C9085_10670 | Not Available | Negative | 2235244 - 2235765 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | C9085_10675 | Not Available | Negative | 2235800 - 2236540 | 26438.1 |
| dihydroneopterin triphosphate diphosphatase | C9085_10680 | Not Available | Negative | 2236569 - 2237021 | 17306.7 |
| aspartate--trna ligase | C9085_10685 | Not Available | Negative | 2237139 - 2238911 | 65873.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





