Escherichia coli strain FWSEC0298

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0298 is a Gram-negative, rod-shaped bacterium that exhibits mobility and possesses flagella. It is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. The strain is mesophilic, with an optimal growth temperature of 37°C, typical for many pathogenic E. coli strains. FWSEC0298 is associated with a wide range of hosts, including Homo sapiens (humans), Gallus gallus (chickens), various mammals including Bos taurus (cattle), Sus scrofa (pigs), and others, as well as certain plant species like Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). This diverse host range highlights its adaptability and ecological significance. The strain is known to be free-living and is associated with numerous health effects in humans, particularly urinary tract infections (UTIs), gastrointestinal infections, and other serious conditions such as septicemia and neonatal meningitis. These pathogenic effects underscore the strain's potential impact on public health, particularly in foodborne infections and clinical settings. Given the strain's ability to infect both humans and various animal species, it is evident that FWSEC0298 plays a significant role in the microbiome of its hosts and can contribute to disease transmission across species. Its wide-ranging pathogenic effects remind us of the importance of monitoring E. coli strains in both clinical and agricultural contexts to mitigate health risks associated with infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0298

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0298
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0298 plasmid unnamed6

Gene Summary

Adenine Count

1311236 bp

Thymine Count

1315804 bp

Guanine Count

1317367 bp

Cytosine Count

1346325 bp

Genome Length

5300977 bp

Protein-coding Genes

4915 genes

Non-Coding Genes

318 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rcs stress response system protein rcsfC9085_04610Not AvailableNegative971736 - 97214014164.3
methionine abc transporter substrate-binding protein metqC9085_04615Not AvailableNegative972258 - 97307329419.2
methionine abc transporterC9085_04620Not AvailableNegative973113 - 97376623257.6
methionine import atp-binding protein metnC9085_04625Not AvailableNegative973759 - 97479037804.7
d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphataseC9085_04630Not AvailablePositive974978 - 97555321325.4
is3 family transposaseC9085_04635Not AvailableNegative975848 - 97612610799.7
duf1076 domain-containing proteinC9085_04640Not AvailablePositive976269 - 97680219423.3
type iii secretion system effector nleaC9085_04650Not AvailableNegative977496 - 97881847485.9
alpha-2-macroglobulin family proteinC9085_04665Not AvailablePositive979620 - 984014162484.0
duf2300 domain-containing proteinC9085_04670Not AvailablePositive984015 - 98566461479.2

Displaying genes 1181 – 1190 of 5263 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total