Escherichia coli strain FWSEC0289

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0289 is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic lifestyle. It is capable of mobility due to the presence of flagella and typically arranges itself in pairs or as singles. This strain is mesophilic, with an optimal growth temperature of 37°C, and possesses a single replicon and two membranes. FWSEC0289 is predominantly host-associated, demonstrating a free-living biotic relationship. It has been identified in a wide range of hosts, including Homo sapiens, various livestock species such as Gallus gallus (chickens) and Bos taurus (cattle), as well as several other animals and plants, including Solanum lycopersicum (tomatoes) and Apis mellifera (honeybees). This diversity in host range suggests that FWSEC0289 may play a significant role in the microbiomes of these organisms, potentially influencing their health and disease states. Clinically, this strain is associated with multiple health effects in humans, including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The presence of FWSEC0289 in both healthy and diseased hosts highlights its potential impact on public health and animal health, where it can contribute to a variety of infections and disease processes. Understanding the ecological roles and pathogenic mechanisms of strains like FWSEC0289 is crucial for developing strategies to mitigate their health impacts in both human and veterinary medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0289

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0289
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0289 plasmid unnamed2

Gene Summary

Adenine Count

1209658 bp

Thymine Count

1208510 bp

Guanine Count

1232957 bp

Cytosine Count

1259172 bp

Genome Length

4916882 bp

Protein-coding Genes

4505 genes

Non-Coding Genes

224 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative small subunit terminaseC9076_22000Not AvailablePositive4554173 - 455473620314.4
Putative large subunit terminaseC9076_22005Not AvailablePositive4554733 - 455639461127.4
Putative major head protein/prohead proteaseC9076_22010Not AvailablePositive4556458 - 455839569002.7
Hypothetical proteinC9076_22015Not AvailablePositive4558440 - 45586618201.73
Putative portal proteinC9076_22020Not AvailablePositive4558607 - 456086883216.4
Head-tail joining proteinC9076_22025Not AvailablePositive4560865 - 456119112240.0
Bacteriophage head-tail adaptorC9076_22030Not AvailablePositive4561202 - 456155212646.3
Putative structural componentC9076_22035Not AvailablePositive4561549 - 456199516745.0
Putative minor tail proteinC9076_22040Not AvailablePositive4561992 - 456233612428.9
Putative tail proteinC9076_22045Not AvailablePositive4562403 - 456311925451.0

Displaying genes 71 – 80 of 4730 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total