Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0280 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287820 bp
Thymine Count
1284913 bp
Guanine Count
1307369 bp
Cytosine Count
1322205 bp
Genome Length
5211182 bp
Protein-coding Genes
4881 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside permease nupg | C9067_15775 | Not Available | Positive | 3284329 - 3285585 | 46392.0 |
| ornithine decarboxylase | C9067_15780 | Not Available | Negative | 3285634 - 3287769 | 79451.5 |
| duf554 domain-containing protein | C9067_15785 | Not Available | Positive | 3288167 - 3288874 | 24659.5 |
| Trna-phe | Not Available | Not Available | Positive | 3288980 - 3289055 | Not Available |
| duf4102 domain-containing protein | C9067_15795 | Not Available | Positive | 3289253 - 3290518 | 47995.0 |
| is66 family insertion sequence hypothetical protein | C9067_15810 | Not Available | Positive | 3291509 - 3292183 | 25564.8 |
| is66 family insertion sequence hypothetical protein | C9067_15815 | Not Available | Positive | 3292180 - 3292527 | 13145.3 |
| hypothetical protein | C9067_15835 | Not Available | Negative | 3295505 - 3295684 | 7012.58 |
| shet2/espl2 family type iii secretion system effector toxin | C9067_15850 | Not Available | Positive | 3298377 - 3300026 | 62144.1 |
| type iii secretion system effector arginine glycosyltransferase nleb | C9067_15860 | Not Available | Positive | 3300634 - 3301623 | 37642.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





