Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0280 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287820 bp
Thymine Count
1284913 bp
Guanine Count
1307369 bp
Cytosine Count
1322205 bp
Genome Length
5211182 bp
Protein-coding Genes
4881 genes
Non-Coding Genes
248 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate bypass operon transcriptional repressor iclr | C9067_11565 | Not Available | Positive | 2437826 - 2438650 | 29672.0 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | C9067_11575 | Not Available | Negative | 2440509 - 2442245 | 67674.3 |
| isocitrate lyase | C9067_11580 | Not Available | Negative | 2442526 - 2443830 | 47524.1 |
| malate synthase a | C9067_11585 | Not Available | Negative | 2443860 - 2445461 | 60339.1 |
| homoserine o-succinyltransferase | C9067_11590 | Not Available | Negative | 2445730 - 2446659 | 35701.2 |
| acetyltransferase | C9067_11595 | Not Available | Positive | 2446816 - 2447259 | 16493.7 |
| type vi secretion system tip protein vgrg | C9067_11600 | Not Available | Negative | 2447626 - 2447947 | 12219.7 |
| cu(+)/ag(+) sensor histidine kinase cuss | C9067_11605 | Not Available | Negative | 2448684 - 2450132 | 54107.6 |
| copper response regulator transcription factor cusr | C9067_11610 | Not Available | Negative | 2450122 - 2450805 | 25396.1 |
| efflux transporter outer membrane subunit | C9067_11615 | Not Available | Positive | 2450962 - 2452344 | 50714.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





