Escherichia coli strain FWSEC0280

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0280 is a Gram-negative, rod-shaped bacterium that is a facultative anaerobe, capable of thriving in both aerobic and anaerobic environments. It is motile, characterized by the presence of flagella, and typically found in pairs or singles. This strain is mesophilic, with an optimal growth temperature of 37°C. FWSEC0280 is primarily associated with various hosts, including humans (Homo sapiens), domesticated animals such as chickens (Gallus gallus), cattle (Bos taurus), pigs (Sus scrofa), and several other mammals, as well as some invertebrates and plants. This broad host range indicates its ecological adaptability and potential for transmission across species. Health effects linked to FWSEC0280 are significant, as it is known to cause a variety of infections, including urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and septicemia. The strain is associated with severe conditions such as hemolytic uremic syndrome (HUS) and can lead to complications like renal failure and cardiovascular diseases. Its pathogenicity in humans reinforces its importance as a public health concern. The presence of FWSEC0280 in diverse ecological niches and its pathogenic potential highlight the complex interactions between this bacterium and its hosts. Understanding its role in both health and disease can provide insights into microbial ecology and the dynamics of host-microbe relationships.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0280

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0280
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0280 plasmid unnamed2

Gene Summary

Adenine Count

1287820 bp

Thymine Count

1284913 bp

Guanine Count

1307369 bp

Cytosine Count

1322205 bp

Genome Length

5211182 bp

Protein-coding Genes

4881 genes

Non-Coding Genes

248 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar phosphatase yidaC9067_09825Not AvailableNegative2069947 - 207075929722.8
duf937 domain-containing proteinC9067_09830Not AvailableNegative2070874 - 207128114145.0
dna gyrase subunit bC9067_09835Not AvailableNegative2071512 - 207392689955.0
dna replication/repair protein recfC9067_09840Not AvailableNegative2073955 - 207502840515.4
dna polymerase iii subunit betaC9067_09845Not AvailableNegative2075028 - 207612840589.1
chromosomal replication initiator protein dnaaC9067_09850Not AvailableNegative2076133 - 207753652553.7
hypothetical proteinC9067_09855Not AvailablePositive2077833 - 20779133111.7
50s ribosomal protein l34C9067_09860Not AvailablePositive2078143 - 20782835380.74
ribonuclease p protein componentC9067_09865Not AvailablePositive2078300 - 207865913790.0
membrane protein insertion efficiency factor yiddC9067_09870Not AvailablePositive2078623 - 20788809381.61

Displaying genes 2161 – 2170 of 5136 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total