Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0272 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1297447 bp
Thymine Count
1296407 bp
Guanine Count
1339771 bp
Cytosine Count
1315483 bp
Genome Length
5259648 bp
Protein-coding Genes
4790 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspi | C9059_20820 | Not Available | Positive | 4259900 - 4260271 | 13573.3 |
| type ii secretion system protein gspj | C9059_20825 | Not Available | Positive | 4260268 - 4260873 | 22393.4 |
| general secretion pathway protein gspk | C9059_20830 | Not Available | Positive | 4260870 - 4261847 | 36599.4 |
| type ii secretion system protein gspl | C9059_20835 | Not Available | Positive | 4261844 - 4263022 | 44210.3 |
| type ii secretion system protein | C9059_20840 | Not Available | Positive | 4263024 - 4263560 | 20394.7 |
| duf4329 domain-containing protein | C9059_20845 | Not Available | Positive | 4263851 - 4264425 | 21436.9 |
| yiix family permuted papain-like enzyme | C9059_20855 | Not Available | Negative | 4265657 - 4266265 | 23156.0 |
| met repressor | C9059_20860 | Not Available | Negative | 4266325 - 4266642 | 12141.4 |
| cystathionine gamma-synthase | C9059_20865 | Not Available | Positive | 4266919 - 4268079 | 41538.8 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | C9059_20870 | Not Available | Positive | 4268082 - 4270514 | 88892.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





