Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0258 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267740 bp
Thymine Count
1265046 bp
Guanine Count
1276314 bp
Cytosine Count
1296850 bp
Genome Length
5116614 bp
Protein-coding Genes
4751 genes
Non-Coding Genes
234 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine synthase e | C9045_12245 | Not Available | Negative | 2574889 - 2575542 | 24881.8 |
| nadp-dependent isocitrate dehydrogenase | C9045_12250 | Not Available | Positive | 2575714 - 2576964 | 45772.4 |
| anti-adapter protein iram | C9045_12255 | Not Available | Negative | 2577067 - 2577390 | 12137.2 |
| hypothetical protein | C9045_12260 | Not Available | Negative | 2577923 - 2578033 | 4216.47 |
| duf1398 domain-containing protein | C9045_12265 | Not Available | Negative | 2578086 - 2578490 | 15770.0 |
| helix-turn-helix-type transcriptional regulator | C9045_12270 | Not Available | Negative | 2578711 - 2579442 | 28266.2 |
| blue light- and temperature-regulated antirepressor bluf | C9045_12275 | Not Available | Negative | 2579647 - 2580858 | 45297.6 |
| two-component-system connector protein ycgz | C9045_12280 | Not Available | Positive | 2581172 - 2581408 | 8729.47 |
| two-component-system connector protein ymga | C9045_12285 | Not Available | Positive | 2581451 - 2581723 | 10345.5 |
| rcsb connector protein for regulation of biofilm and acid-resistance | C9045_12290 | Not Available | Positive | 2581752 - 2582018 | 9694.59 |
Pathways
342 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





