Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin ccdb | C9029_27340 | Not Available | Negative | 5292885 - 5293190 | 11693.2 |
| antitoxin ccda | C9029_27345 | Not Available | Negative | 5293192 - 5293410 | 8372.76 |
| toxin-antitoxin system, antitoxin component, abrb family protein | C9029_27350 | Not Available | Positive | 5293894 - 5294031 | 5197.29 |
| abrb/maze/spovt family dna-binding domain-containing protein | C9029_27355 | Not Available | Positive | 5294009 - 5294239 | 8899.53 |
| pin domain-containing protein | C9029_27360 | Not Available | Positive | 5294236 - 5294652 | 15260.6 |
| transposase | C9029_27370 | Not Available | Negative | 5295331 - 5295467 | 5356.27 |
| hypothetical protein | C9029_27385 | Not Available | Negative | 5296313 - 5296546 | 8736.4 |
| repb family plasmid replication initiator protein | C9029_27390 | Not Available | Positive | 5296860 - 5297837 | 37225.9 |
| site-specific integrase | C9029_27395 | Not Available | Negative | 5298116 - 5298856 | 28137.4 |
| pilus assembly protein | C9029_27405 | Not Available | Positive | 5299279 - 5299860 | 20002.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





